PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Zosma34g00070.1
Common NameZOSMA_34G00070
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Alismatales; Zosteraceae; Zostera
Family bHLH
Protein Properties Length: 172aa    MW: 19503.5 Da    PI: 5.5113
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Zosma34g00070.1genomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH27.36.7e-09105136337
                      HHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS- CS
              HLH   3 rahnerErrRRdriNsafeeLrellPkaskapskK 37 
                      ++hn +Er RR +iN+++  L +l+P +   ++ K
  Zosma34g00070.1 105 EMHNFNERVRRGNINNKIKALHDLIPRS---HNHK 136
                      68************************97...4544 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF474591.14E-796136IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
CDDcd000831.39E-6105139No hitNo description
PfamPF000104.2E-6105136IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene3DG3DSA:4.10.280.101.5E-7105140IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 172 aa     Download sequence    Send to blast
MDFSGEEHRC NNYQIQSDEW KDLDAWIQDD GTGGFIVDEG ENSRNFLSEV VLSEMEKWVW  60
PGFQVTDVIS TPTSVKEVEH TSTNYVTDDK KKSVSSSSYR TATHEMHNFN ERVRRGNINN  120
KIKALHDLIP RSHNHKNVSA AAAAHTINPN LINSMPGIDQ QQQPVIYYPP M*
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
TrEMBLA0A0K9P6S81e-127A0A0K9P6S8_Z